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How much does the CDC undercount Lyme cases? It depends on where you live.

How much does the CDC undercount Lyme cases? It depends on where you live.

The Centers for Diseases Control and Prevention recently compared its annual surveillance Lyme numbers [those that meet the agency’s narrowly defined case definition] to the number of Lyme cases tallied in a major insurance claims data base from 2010 to 2018. Their study concludes that the CDC is still undercounting cases 1.

But, if you dig deep into the numbers, you see that the undercounting is much more severe in some areas—namely in southern and western states. This has huge implications for Lyme patients in those regions, making it much harder for them to get properly diagnosed and treated.

Here are my four main take-aways from the study:

  • Undercounting is the rule: The CDC increased its estimate of annual cases of Lyme disease from 300,000 to 476,000, based on insurance claims made. That’s a 58% increase in estimated cases.
  • Not all states are equal: In states the CDC considers low incidence, only 1 in 50 cases is counted, while in high incidence states 1 in 7 is counted.
  • State-based gender bias: In states the CDC considers low incidence, 63% of cases are female.
  • The revised estimate does not affect surveillance cases reported by the CDC, which reporters and physicians rely on. This leaves the public unaware and harms patients by giving their physicians a false sense of complacency that Lyme disease is not a big problem.

Misdiagnosis of Lyme disease by geography is a big problem

It’s important that the CDC is acknowledging an extraordinary amount of undercounting and it is also important that they are looking at other big data sources (here insurance claims) to see how far off the mark they are. However, the degree to which the CDC surveillance system undercounts cases is not equally distributed geographically. States that are considered low incidence states are disproportionately undercounted.

Here’s a table comparing the amount of underreporting reflected in the reduced number of surveillance cases compared to insurance claims in the CDC study in high-incidence, neighboring states, and low-incidence states:

How much does the CDC undercount Lyme disease?
Table - CDC undercount of Lyme disease in high-incidence, neighboring states, and low-incidence state
Incidence per 100,000 People Based on CDC Characterization as High, Neighboring and Low Incidence State
CDC Lyme disease undercount - incidence per 100,000 - High-incidence states
CDC Lyme disease undercount - incidence per 100,000 - Neighboring states
CDC Lyme disease undercount - incidence per 100,000 - Low-incidence states

What we see is that the undercount is not equal among the three categories: high-incidence states are undercounted by a factor of 7, neighboring states by a factor of 10, and low-incidence states by a factor of 50. Undercounting cases by a factor of 50 means that for every single case identified, the CDC throws out another 49 cases. Thus, the CDC geographic case restriction impairs accurate counting of cases.

How much does the CDC undercount Lyme cases? It depends on where you live.

Moreover, the percentage of increase in cases reported by the CDC compared to insurance claims data shows the same anomalies among the different categories of states.

Table - Differences Between the CDC and Insurance Database Regarding Lyme Disease Growth Rate Percentages
Important Differences Exist Between the CDC and Insurance Database Regarding Growth Rate Percentages Over Time (2010 to 2018)
CDC Lyme disease undercount - incidence per 100,000 - High-incidence states
CDC Lyme disease undercount - incidence per 100,000 - Neighboring states
CDC Lyme disease undercount - incidence per 100,000 - Low-incidence states

The CDC surveillance counts place a heavy emphasis on “high incidence” states—which are primarily confined to the East Coast and Midwest as the map below illustrates.

CDC Lyme Disease Incidence Map

Unfortunately, saying that a state is either high or low incidence oversimplifies the complex geographic distribution which is driven by whether the local ecosystem will support and sustain the tick population that carries Lyme disease. In California, for example, there are areas as highly endemic as the east coast. The CDC totally ignores such variation within a single state. This emphasis on high incidence states is not only inaccurate, it also leads to misdiagnosis in other states where clinicians are led to believe the risk is not present. The feedback loop is further distorted because the CDC case report form includes endemicity as a requirement for counting cases, which in turn reflects awareness of risk, physician diagnosis, and counting of future cases. This misleading feedback loop will artificially suppress case counts in areas outside the Northeast and Midwest in perpetuity until it is abandoned.

For years, the Lyme community’s complaints about misdiagnosis by geography have fallen on deaf ears. Although the study increased the number of cases by 58% with the new 476,000 estimate, it also demonstrates how much cases in low incidence states are under-counted compared to high incidence states when different data sources are compared.

So for example, while surveillance data shows 93.2% of cases in high-incidence states, insurance data shows only 80.5%. That’s a 12% difference and it matters. It means that the CDC is undercounting cases in states that it does not characterize as high-incidence. We know this is likely true because another insurance data base study showed many states the CDC considers to be low incidence states to be in the top five states in insurance claims.

As reported in the Wall Street Journal: “North Carolina reported 32 Lyme cases to the CDC in 2016 but in the same year made 88,539 health-care claims for a Lyme diagnosis. California reported 90 cases to the CDC but had 46,820 claims. Texas reported 31 cases to the CDC but had 31,129 claims. All three are considered low incidence states 2”.

We also see this in the differences between MyLymeData geographical distribution of cases compared to the CDC below. The states in blue have a higher number of people enrolled in MyLymeData than are included in total CDC Lyme disease case reports. (In green states, the CDC has more cases.) The differences reflected on the map suggest a broad pattern of underreporting by the CDC of Lyme disease in the South and the West.

Differences between MyLymeData geographical distribution of cases compared to the CDC

If the CDC is going to look at real word data, it should be willing to consider that its preconceived notions of geographical distribution are incorrect and “listen to the data.”

A similar variation in seasonality occurred. A higher proportion from high-incidence states (59%) occurred during the summer compared with diagnoses from neighboring (53%) and low-incidence states (42%). This may reflect the warmer weather in the west and southwest and an extended tick season.

Do more males have Lyme disease than females? It depends.

Distributions by sex also differed across high-incidence, neighboring, and low-incidence states. Male patients accounted for a greater proportion of diagnoses in high-incidence states (50.8%) than in neighboring (41.9%) and low-incidence (36.6%) states. Biodiversity of strains and ticks across different ecosystems may affect males and females differently. But the fact that 63% of cases in low incidence states are female underscores the fact that gender-based assumptions may not accurately reflect the real world data. We do not know.

The CDC’s increased Lyme disease case estimate is important, but not enough.

The increase should be viewed as part of an effort by the CDC to find other ways of tracking Lyme cases because the current surveillance system is essentially broken. The current surveillance system imposes too great a burden on healthcare providers and on the local departments of health. As a result, cases are simply not reported. Streamlining this process by using either automated laboratory results or insurance claims from sources that already exist would dramatically reduce these burdens and hopefully more accurately reflect cases that occur in the real world.

Significantly, the new CDC study concludes that the MarketScan insurance claims data they used “provided a stable source of data for . . . diagnosis. . .that could serve as a resource efficient adjunct to surveillance.”.

The CDC’s increased estimate based on it’s comparison of real world insurance claims data to surveillance data is important. Even this increase widely misses the mark though. MyLymeData tells us that 50% of patient report that their clinician does not accept insurance. Those patients may not be included in the insurance data base.

50% of Lyme patients report that their clinician does not accept insurance
50% of patient report that their clinician does not accept insurance

I am also bothered by the fact that when the geographic real-world data differs from the surveillance data, the CDC assumes that the real world data is wrong—that it’s due to miscoding or misdiagnosis. Why not consider the possibility that the CDC’s surveillance data could be incorrect? That independent data sources may provide us with a look at a larger reality and geographic and gender-based difference that require a deeper examination?

We know that the surveillance data is skewed because it has inherent biases for cases that present with a rash and for cases that are geographically on the East coast or Midwest. Both of these factors play a large role in meeting the requirements of the surveillance case definition. Even with the increased estimate in cases, patients in the south and west will continue to be harmed by delayed and missed diagnosis because of the weight the CDC places on geography in the surveillance case reporting.

It’s good news that the CDC has increased its estimate of the annual number of cases after seeing that they are well below insurance claims cases. It would be better if they overhauled their surveillance case definition so that reporters don’t use these drastically under counted cases in their news articles and physicians are given the tools to promptly diagnose patients.

  1. Schwarz, A.; Kugeler, K.; Nelson, C.; Marx, G.; Hinckley, A. Use of commercial claims data for evaluating trends in Lyme disease diagnoses, United States, 2010–2018. Emerg Infect Dis. 2021 Feb 2021, doi:
  2. McGinty, J. Lyme Disease: An Even Bigger Threat Than You Think: A look at why cases of the tick-borne illness are undercounted. Wall Street Journal June 22, 2018.

If you are a patient who is not enrolled in MyLymeData,  please enroll today. If you are a researcher who wants to collaborate with us, please contact me directly.

The MyLymeData Viz Blog is written by Lorraine Johnson, JD, MBA, who is the Chief Executive Officer of You can contact her at On Twitter, follow her @lymepolicywonk

About MyLymeData Lyme Disease Research
MyLymeData Lyme Disease Research
About MyLymeData Lyme Disease Research

MyLymeData is one of the largest patient-driven registries in the nation, with over 17,000 patients enrolled. It was created by patients, is run by patients and will address the issues that Lyme disease patients care about. MyLymeData Viz provides the community with results from MyLymeData. If you are enrolled in MyLymeData, we thank you for providing the data that will accelerate the pace of research in Lyme disease. If you are not enrolled, please enroll today.

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